ORNL scientists discover cancer trigger; could spur targeted drug therapies

Debjani Pal’s work with cancer cell lines informed the linkage between signaling pathways in the PAN protein domain and the growth of cancerous tumors.
Debjani Pal’s work with cancer cell lines informed the linkage between signaling pathways in the PAN protein domain and the growth of cancerous tumors.

Oak Ridge National Laboratory research could lead to new therapies for some types of cancer.

The team’s findings, published in Nature Communications Biology, open up a new avenue for the development of selective drug therapies to fight a variety of cancers such as those that begin in the breast and stomach.

The discovery could lead to treatments for other diseases, according to an ORNL news release. Examples given included disrupting the infection pathway in mosquitos to make them less able to carry the malaria parasite, and fighting the Huanglongbing (HLB) virus killing citrus trees in Florida and California by targeting the Asian citrus psyllid insect that spreads it.

The ORNL researchers have definitively linked the function of a specific domain of proteins important in plant-microbe biology to a cancer trigger in humans. This knowledge has eluded scientists for decades, the release stated.

They set out to prove experimentally what they first deduced with computational studies: that the plasminogen-apple-nematode, or PAN, domain is linked to the cell proliferation that drives tumor growth in humans and defense signaling during plant-microbe interactions in bioenergy crops. The association was first made as researchers explored the genomes of crops like poplar and willow.

In the latest study, the ORNL team pinpointed four core amino acids called cysteine residues in the HGF (Hepatocyte growth factor)  protein critical to the PAN domain’s function and studied their behavior in human cancer cell lines. They found that mutating any one of those amino acids turned off the signaling pathway known as HGF-c-MET that is abnormally heightened in cancer cells, causing them to rapidly multiply and spread.

Since cysteine residues are known to have many functions, the scientists also randomly tested other cysteines throughout the protein and found that none of them had the same impact on shutting down HGF-c-MET signaling. Mutating the four key cysteines had no effect on the overall structure of the protein, and merely inhibited the cancer signaling pathway, the team noted in the study.

Disrupting the right signal is one of the biggest challenges in developing new cancer therapies, ORNL geneticist Wellington Muchero stated in the release.

“It’s very difficult to engineer molecules to interfere with an entire protein,” he stated. “Knowing the specific amino acids to target within that protein is a big advancement. You don’t have to search the entire protein; just look for these four specific residues.”

"The identification of those core residues is a testament to the predictive power the team has built at ORNL, leveraging the lab’s expertise in plant biology and biochemistry, genetics, and computational biology, as well as its supercomputing resources and the CRISPR/CAS-9 gene editing tool," the release stated.

Geneticist Wellington Muchero leads the research team at ORNL that has linked the PAN protein domain to tumor growth in humans and plant-microbe interactions in plants.
Geneticist Wellington Muchero leads the research team at ORNL that has linked the PAN protein domain to tumor growth in humans and plant-microbe interactions in plants.

Plants, humans DNA

In plants, ORNL scientists are using their knowledge of the PAN domain to improve resistance to pathogens and pests in biomass crops, such as poplar and willow, that can be broken down and converted to sustainable jet fuel. They are exploring the genetic processes that encourage beneficial interactions between plants and microbes to build hardiness in those crops.

The research demonstrates the close similarities in the DNA structure of plants, humans and other organisms, which make plants an important discovery platform, Muchero stated. “We can do things with plants that you cannot do with humans or animals in the research process,” he added.

“I can work with equal efficiency in plant and human cancers. The expertise is the same,” stated Debjani Pal, an ORNL postdoctoral researcher with a background in biochemistry and human cancer research. “We’ve established a globalized experimental platform here at ORNL that shows no matter what system you’re using, plant or animal, if your hypothesis is correct then the science is repeatable in all of them, no matter what cell line you’re using.”

Debjani Pal, from left, Wellington Muchero and Kuntal De have created a platform to study the function of the PAN protein domain whether it is in plants, humans or other organisms, which could lead to advances in drug therapies and hardier bioenergy crops.
Debjani Pal, from left, Wellington Muchero and Kuntal De have created a platform to study the function of the PAN protein domain whether it is in plants, humans or other organisms, which could lead to advances in drug therapies and hardier bioenergy crops.

“At the bottom of it all, we have the same biological underpinnings,” Muchero said.

Other members of the team in ORNL’s Biosciences Division include Kuntal De, Carly Shanks, Kai Feng, Timothy Yates, Jennifer Morrell-Falvey, Russell Davidson and Jerry Parks.

ORNL scientists identified four amino acids key to signaling pathways in the PAN protein domain. Mutating any of those four resulted in disruption of the signal that tells cancer cells to multiply and spread in humans. Credit:
ORNL scientists identified four amino acids key to signaling pathways in the PAN protein domain. Mutating any of those four resulted in disruption of the signal that tells cancer cells to multiply and spread in humans. Credit:

This article originally appeared on Oakridger: ORNL research could spur cancer therapies